COVID vaccines, timeline update

Short update on COVID vaccine timelines. US/EU timelines have slipped by 1 -3 months, but China has held up since my August estimates. Treat all estimates with caution etc.

I thought I would update on my speculative COVID vaccine thoughts given the moving timelines here. There are >100 vaccine projects and COVID treatments in motion, and although recent vaccine timelines have slipped, it looks ;like we will have a vaccine at some point. When? is a key debate. Given the challenges around public health interventions, (lockdowns etc.) in EU/NA - one way we can cut the knot is to go fast on the vaccine. This is one reason why (althoguh not without some downsides) I support the UK challenge trials starting in early 2021. That said we have some decent chances of vaccines by very late this year / Jan 2021. Below is a moderatel positive scenario of how the US could be vaccinated in 2021.

Oct 2020, estimates. Treat with caution.

Oct 2020, estimates. Treat with caution.

I think China will have a vaccine starting to distribute to the public by Dec 2020. Chinese officials have indicated data is positive and they are willing to approve.

The UK has an 80% chance (IMO) of a vaccine in Dec/Jan for at risk populations (AZ/Oxford, timelines, newspaper leaks) under emergency approval. The early data is promising and despite the delays, if there were serious safety issues I would have expected to have had more negative news here.

The US has a chance for an emergency vaccine approval late Dec (slipping) or Jan, there are two shots on goal here (Moderna and Pfizer), and I rate the chances around the 70% level (although 40% and dropping for before year end as both have slipped, but still at 70% or so in Q1 2021 time frame). (This is down slightly from earlier due to challenges in the trials). Again early data is promising and no catastrophic safety events seen. Full approvals are more debatable than emergency (as hurdles different, but mixed messages from FDA makes this uncertain). The AZ trial stalled for longer in the US, so is more likely a Q1 2021 event as US don’t seem to want to recognize the UK/EU regulators view here.

Antibody treatments (Regeneron/Roche, Lilly) have a 90% chance of emergency approval before year end, but are only available in limited doses of around 5m to 10m doses pa. Data has been positive especially in the mild-moderate pateients.

12 Oct, 2020 Source: Gallup for Sep survey.

12 Oct, 2020 Source: Gallup for Sep survey.

There are a lot of variations on scenarios here, and supply and distribution as well as anti-vax movements are all other factors to consider. Some polls but vaccine willingness only at or so 50% in the US. Debates  arise are on (1) Willingness to vaccinate (2) Regulatory caution around durability as well as efficacy (3) social-political pressures.

It is of note that China is more advanced here seemingly than NA/EU and generally the countries outside of EU/NA are potentially faring better.

15 Leading vaccine projects, Source: Milken, press releases

15 Leading vaccine projects, Source: Milken, press releases

COVID Vaccine coverage estimates

An assessment of COVID vaccine coverage in 2020 - 2022

—> 80% (*) chance of a US vaccine approval by year end 2020

—> 60% chance that the US will have enough supply of vaccine to cover the country by mid 2021

—> 60% chance significant part of world is covered by early 2022

(* This estimate dipped in Sep but has rised by Nov, and should probably now nudge 90% for Dec/Jan approval due to both Pfizer and Moderna vaccines hitting)

Table 1. Source: Milken Institute, Press Releases, Author estimates. No approvals are certain. One vaccine in Russia and one vaccine in China have been approved for certain use.

Table 1. Source: Milken Institute, Press Releases, Author estimates. No approvals are certain. One vaccine in Russia and one vaccine in China have been approved for certain use.

I estimate an 80% chance of a vaccine approval by year end 2020 and a 60% chance that the US will have enough supply of vaccine to cover the country in first wave by mid 2021. (Although note as counter point on the safety risk you can note this article on the 1976 Swine flu).

The base case uses the public announcements of the large sophisticated UK and US groups. (See Table above). 

Downsides are from (1) negative data and (2) negative regulators; other possible downside are from (3) manufacturing constraints and (4) distribution constraints; and (5) vaccine hesitancy (certain anti-vaccine sentiments). Note (1) and (2) are separate risks as there may be data positive enough for patient choice (or developers to submit) but not enough to convince (risk averse) regulators. 

Upsides are from (a) China developers and possibly  (b) Russian development although I do not see those vaccines coming to Europe or the US but may well go to Asia and LatAm in H2 2021. A detailed overview of the developer groups is available from the the Milken Institute (link end) and WHO. I select a highlight below to give a sense of (i) the variety of technology mechanisms in play here and (ii) the colloborative group nature of the development even while there typically is a lead group.

Source: Milken Institute, slight author edits.

Source: Milken Institute, slight author edits.

Further upside would be positive data from manufactured antibody studies (eg Regeneron/Roche) which are due Q4 2020. The two major studies due in Q4 2020 are (a) Regeneron/Roche and (b) Lilly/AbCellera. If these are positive, then the Regeneron collaboration would add 4m to 8m prevantative doses to the calculations below.

I am less worried about distribution because:

—>vaccination during the flu season routinely reaches 50% of the population, thus distribution efforts are likely surmountable (cf US wholesaler deal with McKesson which is an experienced organisation). Also fill/finishers (packing the finished product) such as Catalent are already involved.

—> some nucleic-acid based vaccines may be distributed frozen, but appear stable for several days in regular refrigeration

The leading makers are also fully flying on manufacturing and there is expertise from flu vaccine and animal vaccines and outsourced makers (eg Lonza). I have toured vaccine plants (which are typically under utilised compared to chemical plants) and the technology and expertise from the leading makers is competent at scale, although this current speed is much faster than before - in my view, it’s not been out of reach for biopharma.

There are previous papers on biopharma probability of success. And while certain technology is new eg mRNA-based vaccines, much of the expertise on coronavirus and vaccine understanding has a high degree of understanding. Severe side effects (or long-term side effects) are risks (particularly from our understanding of side effects from previous RSV vaccines) but current data from multiple trials are not yet picking up a nasty effect. Although the trials are small, and many are across different products, the fact that there are multiple trials running across different geographies and populations gives statistical strength to the net probability of success. (Link end, see my primer on forecasting).

Some vaccines will fail. Some supply bottlenecks will materialize. New bottlenecks, so far undiscovered will appear.  But the net effect of so many shots on goal is that a first wave of vaccinations can be done in the US by mid 2021 and quite likely globally by end 2021 / early 2022. The stated capacity up to 1bn doses of many of the possible successes balances out those vaccines that will fail.

Source: Author estimates, Company Press releases, transcripts of managment calls. This table looks only at US, however similar calculation can show reasonable global coverage by mid 2022. Note, vaccination = 2 x doses in most cases as two doses requ…

Source: Author estimates, Company Press releases, transcripts of managment calls. This table looks only at US, however similar calculation can show reasonable global coverage by mid 2022. Note, vaccination = 2 x doses in most cases as two doses required.

There will need to be boosters (maybe every 2 years, possibly every year) and possibly - like flu - new strains will have to be made yearly if the virus ends up mutating and still being lethal, but my view is that we now are looking pretty likely to be on track to solving this one.

Source: Milken Inst, Press releases, Author estimates. Note: Private funding may not be but have not assertained. DOD = Dept of Defence, HHS = Human Health Services. BARDA = Biomedical Advanced Research and Development Authority. CEPI = Coalition fo…

Source: Milken Inst, Press releases, Author estimates. Note: Private funding may not be but have not assertained. DOD = Dept of Defence, HHS = Human Health Services. BARDA = Biomedical Advanced Research and Development Authority. CEPI = Coalition for Epidemic Preparedness Innovations . EC = EU Commission. EIB = EU Investment Bank. GAVI = Vaccine Alliance. GAtes = Bill and Melinda Gates Foundation.

While there will be many debates on the public health responses of various countries, it’s notable that the US, China and the UK are the geographies where the developing makers are concentrated with honourable mentions to a few countries such as France (Sanofi) and maybe Germany (CuraVax). Adjusting for population keeps UK in the spotlight (note Tyler Cowen has highlighted this in his column, link end).

Understanding this is insightful as the observation centres around historic expertise in vaccines and biological manufacturing capability from GlaxoSmith Kline, AstraZeneca and the Jenner Institute (Oxford University).  There is a learning here too for the unfortunate circumstance of much of biopharma closing down antibiotic research (in reality because of lack of commerical markets arguably due to inability to be able to price effectively as generics for old drugs are cheap and systems won’t pay enough for novel antibiotics).

After arguably a slightly slow start US government, the BARDA programme, looks fairly effective and the US biopharma response across the spectrum has been pretty good (I’d also include most global biopharma where they have expertise eg Roche partnered with Regeneron as well as executing on diagnostics, Novartis where it had technology (hydroxychloroquine). 

China is hard to assess sitting at a desk outside China, but impressions also seem favourable given they have many shots in the leading group and the sheer number of smaller biotechs working in the area (see Milke Institute tracker) is large at earlier stage. 

Overall, this to me looks like a win for science and innovation and perhaps shows we as humans can still build things (fairly fast) when needed.

Background assumptions to consider:

Vaccine developers will begin delivery of vaccine at the earliest possible date of approval and deliver the purchased amount over 6 months. The exception to this logic is AstraZeneca where the purchase volume is significantly greater (although the terms of the agreement are unclear).

There is an adjustment from 'doses' to 'vaccinations' based on whether each vaccine will require a second dose (booster). Immunogenicity data from Pfizer, Moderna, AstraZeneca and Novavax all suggested that that a booster will likely be required. 

Limited EUA (emergency use authorisation) will likely prevent supply shortage even early on. If vaccines were approved for the entire US population in late 2020, there would be shortages until March 2021. Still this seems unlikely. The initial market entry based on EUA will be based on convincing efficacy data. In contrast, safety data will be broad (10,000s  patients) but of relatively short duration, as the trials are expected to accumulate events (infections) quickly. 

Given political pressures, historic risk aversion when full data lacking (also note recent complete response letters to novel treatments eg gene therapy haemophilia, JAK inhibitor, in Q2 / Q3 2020)  FDA would limit the use to high-need groups (essential employees, high-risk comorbidities). If this is the case, then pre-approval manufactured amounts will be sufficient to satisfy demand.

I would still support informed patient choice in this scenario (see my previous paper) but I doubt we will have it. 

Links:

My forecasting Primer including on drug probabilty forecasting.

Milken Institute Data

My early vaccine use idea based on patient choice.

Tyler Cowen on UK COVID response.

UK all cause death below 5 year average

UK all cause death now below 5 year average. (Still some COVID deaths offset by fewer non-COVID deaths).

Screenshot 2020-07-26 at 12.20.35.png

You can see the approx trend (ofc certain problems with data) on UK COVID deaths here from World in Data.

Screenshot 2020-07-26 at 11.21.08.png

Around 1200 to 1500 people die in the UK a day. As of end July around 60 of those deaths are COVID-realted. This suggests about 80 - 100 non-COVID deaths are currently not happening (although some of this is likely pull through where sick elderly died a little earlier in the year but were still likely to pass in 2020).

This - at least in the short term - suggest lockdown and perhaps certain areas of (lack of) activity are positive for death rate eg accidents, maybe drugs + alcohol ? I wonder about long-term eg diet and exercise? But, actually enforced home stay --> more home cooking --> healthier ? And maybe exercise is possibly over-rated??? (Maybe wishful thinking here).

In England and Wales you can see some COVID/Non-COVID splits here: (England/Wales were running below average in the early part of the year pre-COVID, so it’s possible there’s been a slight positive structural trend on a 5 year view eg via wealth and health effects, I’m unsure)

Screenshot 2020-07-26 at 12.31.20.png

Link to UK ONS here.

Link to World in Data.

Addendum: Turns out the Imperial team have looked at this. They note this:

Possible interpretations of excess non-COVID-19 deaths

If excess non-COVID-19 deaths are higher than expected deaths: First, it is possible that deaths actually caused by COVID-19 are incorrectly attributed to other conditions. This could be due to lack of a diagnosis, nonspecific symptoms before death, multimorbidity making attribution of death difficult, lack of knowledge by the reporting medical staff, or stigma-related concerns of family members. Non-COVID-19 related deaths could be genuinely higher during the pandemic. First, the pandemic has caused disruption to healthcare provision. Hospitals have cancelled elective surgeries in some weeks, possibly resulting in increased mortality in those patients. Second, even critically ill patients may be reluctant to access care, for fear of hospital-acquired infections. Both inability and reluctance to access care may have led to patients’ death, when they would have survived in the absence of the pandemic.

If excess non-COVID-19 deaths are lower than expected deaths: This finding could be due to irregularities in reporting. Second, the reduction in mobility and travel associated with control measures, particularly stay-at-home orders, may result in a reduction in accidents and associated deaths. Third, it is also possible that COVID-19 disease may cause mortality displacement, a short-term forward shift in mortality whereby a certain proportion of deaths due to COVID-19 occurred in patients that would have died of other conditions in the following weeks or months. This implies that over time, COVID-19 deaths that are higher than expected all-cause deaths are followed by lower than expected non-COVID-19 deaths in the following weeks and months, resulting in a deficit in excess non-COVID-19 deaths. In addition, hospitals have increased their capacity over time to treat non-COVID patients or patients changed their behaviour and started visiting hospitals again resulting in a reduction in deaths in line with expected levels.

Variations in deaths: The figures show steep increases and declines for COVID-19 deaths and unexplained deaths in some regions and for some ages over the weeks since March 2020. In some regions and weeks, excess non-COVID-19 deaths are even lower than expected deaths. These findings could have several explanations. First, case numbers vary over the pandemic, leading to variations in hospitalizations and deaths with a 2 to 3 weeks delay on average. Second, there may be irregularities in reporting. For example, in the first weeks of the pandemic, deaths due to COVID-19 may have been wrongly attributed to other conditions instead of COVID-19 but and in later weeks, non-COVID-19 deaths may have been wrongly attributed to COVID-19.

More details and splits here from the Imperial Team.

Adjustments.jpeg

What mindsets for investing markets can help with COVID thinking

What Markets can teach us

Markets are humbling.

As an intelligent - even extremely intelligent - young analyst. No matter how good she is. There will be decisions she misjudges. 

There are many uncertainties in markets and as I’ve referred to in my aphorisms - and others - one of the only certainties are the uncertainties.

The mental mindset to deal with those uncertainties and still make decisions - that have great weight as measures in millions or billions of dollars - takes training. By the time a young person forms into an adult much of that mindset may already be settled although more can be trained and the mindset can be continually worked upon.

This resilience or even antifragility (where you thrive on the uncertainty)  to deal with this in typical financial markets turns out to be useful for COVID.

There are uncertainties with COVID, tail (small but with large effects) risks, but decisions have to be made and may turn out to be wrong. Yet, you will have to make them.

Many analysts turn out not to be cut out for markets and investing as the strain on the mental mindset is too much. Unsurprisingly, COVID has caused strain on the mental health of many I know but there are lessons to be learnt for dealing with such risks.

  • Rely and assess the data. (see previous thoughts on forecasting and decision making).

  • Change mind if needed and reassess.

  • Don’t let the weight of the decision damage you.

  • You can control, what you can control.

  • What you can not control - you have to make peace with - as it is out of your control.


The same can be said for living with many aspects of special needs (disability) or other circumstances…

Here’s a piece on finding insights in the ordinary or even “boring” from travels with autism: Mindfulness and trains and here on what do you “see” when travelling on trains and buses

My book of aphorisms

Previous blogs on forecasting and decision making

Policy Idea: Regulators Could Allow Early Use of COVID-19 Vaccine or Treatment

My paper was accepted by the Mercatus Center at George Mason University:

Quickly developed therapeutic, prophylactic, and vaccine treatments will be essential to defeat the COVID-19 pandemic. Standard regulatory and development protocols typically yield drug development in 6 to 11 years. However, experimental vaccines and prophylactics against COVID-19 are in development and currently in trials, making deployment after safety trials feasible within months. Though efficacy of these treatments is uncertain, with probability of success, on average, at just 16 percent, efficacy can still be tested in real-world settings by adopting an approach that allows patients to begin drug treatments earlier in the regulatory process.

After phase I trials have been completed and data have been gathered, an expert committee should be convened to advise on the risk, benefit, and chance of success of the novel agent with a view toward distribution to the public through patient choice. There is limited downside risk and a good chance of a positive outcome with this approach. The US Food and Drug Administration (FDA) has the authority to approve pharmaceuticals requiring further trials, but the success of this approach will depend on coordination between sponsoring research organizations, trial designers, and regulators. International pharmaceutical regulators, such as those in the United Kingdom, Europe, or Japan, can also adopt this approach.

At this point, a clear indication of regulators’ openness to this approach would provide certainty for organisations and accelerate development of possible vaccines and treatments. When adjusting for probability, this approach may save hundreds of thousands of lives in the United States and more globally.

More here at this link at Mercatus. Or full PDF here.

Under a traditional approach, a 50 person phase I trial might not be considered enough data to make strong judgments on safety and efficacy. It’s considered exploratory. However imagine…

10 separate Phase I trials (or trials with adaptive design) start in April 2020 across multiple countries. Patient numbers and characteristics (eg age, presence of COVID-19 antibodies, sex) are careful considered. The statistical power of multiple trials is stronger than one or two trials. 10 trials of n = 50 (say, up to 100) could be run in US, China, Italy, UK, Germany, France, South Korea to name a few countries with R&D capabilities with either commercial or non-profit led organisations that could run such trials. Results could be available in July. These data would include safety data, and preliminary measurements of efficacy such as COVID-19 antibodies.

Each interested country could convene its own expert and stakeholder committee. That committee could vote on if tentative approval should be given based on a benefit and risk assessment of the data. This meeting should be held in public and take submissions from stakeholders potentially replicating FDA advisory committee meeting processes or similar. A citizen’s jury process could run given the state of public interest.  

In an optimistic scenario of no safety signals and strong efficacy signals, this would allow a September 2020 launch with high risk populations such as over-65s and healthcare workers prioritised. This is subject to commercial scale up of manufacturing. Funding for this should be given in April in hope of a positive scenario. In a pessimistic scenario, negative safety signals would not warrant tentative approval. The downsides would be limited to the volunteer trial participants and the investments taken.

The cost of running 10x phase I/II trials now is perhaps between $200m to $1bn. Given that this could solve the problem - it seems to be something that governments should be doing or incentivising. Especially vs fiscal bail outs wheich are 1000x this amount.

Now the data might come back negative - in which case there is no quick vaccine. But, if there were very strong efficacy signals and no safety signals then this should be something for governments and regulators to consider.